Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928439.1_cds_XP_016475994.1_67870
CDS Infomation

[gene=LOC107797608] [db_xref=GeneID:107797608] [protein=heat stress transcription factor A-5-like] [protein_id=XP_016475994.1] [location=join(7303..7536,10952..12154)] [gbkey=CDS]
Sequence

ATGGATGTAATTTCAGCTACGGCTGCTGCCACCGGAGGAGGAGGAGGTCCGGCGCCGTTC
TTGCTAAAGACATATGAAATGGTAGATGATTCGCAAACTGATGATATAGTTTCTTGGACT
CCGACAGGTCACAGCTTTGTTGTTTGGAATCCTCCGGAATTTGCTCGAATTCTTCTTCCT
ACTTATTTCAAGCACAACAATTTCTCCAGTTTCATCCGTCAGCTCAACACCTATGGCTTC
CGGAAGATTGATCCTGAAAGATGGGAATTTGCCAATGAGGAATTTGTGAAAGACCAGAAA
CATCTCCTTAAGAATATTCATCGTAGGAAACCGATTCACAGCCATAGTCACCCTCCAGGT
TCCACAGTTGATCCAGAAAGAGCTGCATTTGAGGAAGAGATTGATAAGCTTTCACGTGAG
AAGTCTGGGCTCGAGGCTAATGTCTTAAGGTTCAGACAGCAACAATCTGCTGCAAAACTC
CAGCTAGAAGAAATGACTGAGCGGGTTGGCGGTATAGAACAAAGGCAAGAGAGTTTACTG
ACATTTGTTGAGAAGGCAGTTCTGAATCCTGACTTCGTTGAGCGTCTTGCTCAGAAACTC
GAGTCCATGGATATTTCTGCATTTAGCAAGAAGAGGCGATTACCTCTAGTCGACAGCTCT
CAACCAGTTCAAGAAAATATGTCGGTAGACAACCATAGCAGTTCTGGAGTTGAGTTTGGG
AACCTTTGCAACCAAGACTTTTCAAACAAGCTCAGGCTCGAATTGTCACCTGCTGTTTCG
GATATCAACGTTGTTTCGTGCAGCACCCAAAGTTCGAATGAAGATGGTGGAAGCCCGCAT
AGGAGAATATCTGAATGTTGGTCCAGAGAAGTGCAACTTCGAACGGGGGGAGTAATTTAT
ACCCCTGAAGCAATAGAACTATCAGATACAGGGACGTCTTTTACATTGAAGATGGATTCA
TCTTTGCCTCGTGCAGCAAGCAATGTTGAAAGCTCAAGACTTCATTCCTTGCCACAAAGC
CTAATATCTAACGAGGAAGTTGACGGTCACATCTCCTGCCAGCTGAATCTTTCTTTGGCT
TCGTGTCTTTCACAAGTCGATAAAAATCAACATTCATTGAGGATGACTCTAATAGGTCAA
GAGATGAGTAAACATTCTGAATCACAGTCTGATGCCAATGGCAAAAATCCTCCTAATGAT
GACAAATCCTTGCCACCTTCACATGATGCAACTGGTAACAAGCAAGGGGCTGCAACTACT
CAGGTTCGAGTCAACGATGTTTTTTGGGAACAGTTCCTAACGGAAAGACCGGGCTGCTCG
GATAATGAAGAGGCTAGCTCTAGTTTCAGAGGGAACTCTTATGATGAGCAAGATGATAGA
AAACCAAATCAAGGAGTAACTAGTAACACAAGAAAGGTGGAACACCTTACCCTCTGA

Peptide Sequence

PEP ID

XP_016475994.1
PEP Infomation

PREDICTED: heat stress transcription factor A-5-like [Nicotiana tabacum]
Sequence

MDVISATAAATGGGGGPAPFLLKTYEMVDDSQTDDIVSWTPTGHSFVVWNPPEFARILLP
TYFKHNNFSSFIRQLNTYGFRKIDPERWEFANEEFVKDQKHLLKNIHRRKPIHSHSHPPG
STVDPERAAFEEEIDKLSREKSGLEANVLRFRQQQSAAKLQLEEMTERVGGIEQRQESLL
TFVEKAVLNPDFVERLAQKLESMDISAFSKKRRLPLVDSSQPVQENMSVDNHSSSGVEFG
NLCNQDFSNKLRLELSPAVSDINVVSCSTQSSNEDGGSPHRRISECWSREVQLRTGGVIY
TPEAIELSDTGTSFTLKMDSSLPRAASNVESSRLHSLPQSLISNEEVDGHISCQLNLSLA
SCLSQVDKNQHSLRMTLIGQEMSKHSESQSDANGKNPPNDDKSLPPSHDATGNKQGAATT
QVRVNDVFWEQFLTERPGCSDNEEASSSFRGNSYDEQDDRKPNQGVTSNTRKVEHLTL

Transcript Sequence

Gene sequence data has not been registered.